Simulation report
Technical information
General information
Name: Glucagon-like peptide 1 receptor in complex with myzidyjmnwejmc-qhcpkhfhsa-n
PDB id: 6KK7
Activation state: Inactive
Description: Classical unbiased (NVT ensemble) complex flexibility assay.
Submitted by: GPCRmd community
System setup
Solvent type: TIP3P
Membrane type: Homogeneous
Membrane composition: POPC
Ionic composition: Sodium ion (157 mM), Chloride (172 mM)
Number of molecules:
Water: 25539
POPC: 324
Chloride: 79
Sodium ion: 72
CHEMBL3648185: 1
Glucagon-like peptide 1 receptor: 1
Total number of atoms: 125333
Simulation details
Software and version: ACEMD3, GPUGRID
Forcefield and version: CHARMM, c36 Jul 2020
Time step : 4.0 fs
Delta : 0.2 ns
Replicates: 3
Accumulated simulation time: 1.5 µs
Additonal parameters: Available at "Simulation protocol & starting files"
Simulation components
Ligands
Receptor
Mutations
No mutations found
