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Simulation report

Technical information

General information

Name: Angiotensin ii type 1 receptor (apoform)

PDB id: 6DO1

Activation state: Active

Submitted by: GPCRmd community

System setup

Solvent type: TIP3P

Membrane type: Homogeneous

Membrane composition: POPC

Ionic composition: Chloride (317 mM), Potassium ion (261 mM)

Number of molecules:

Water: 10000

POPC: 178

Chloride: 57

Potassium ion: 47

Type-1 angiotensin II receptor: 1

Total number of atoms: 82917

Simulation details

Software and version: GROMACS, 2016.4

Forcefield and version: CHARMM, CHARMM36

Time step : 2.0 fs

Delta : 0.6 ns

Replicates: 1

Accumulated simulation time: 2.0082 µs

Additonal parameters: Available at "Simulation protocol & starting files"

Simulation components

Receptor

Visualization and trajectory sharing powered by NGL viewer and MDSrv

Open with GPCRmd Workbench

Mutations

No mutations found



Other molecules



POPC

Specific State ID: 5018

(178 molecules)


Chloride

Specific State ID: 5017

(57 molecules)

Cl-


Water

Specific State ID: 5019

(10000 molecules)

H2O


Potassium ion

Specific State ID: 5159

(47 molecules)

K+


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