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Simulation report

Technical information

General information

Name: Ntsr1-gi (apoform)

PDB id: 6OS9

Activation state: Active

Submitted by: Nagarajan Vaidehi, Beckman Research Institute of the City of Hop

System setup

Solvent type: Implicit

Membrane type: Implicit

Number of molecules:

CID 6830: 1

Magnesium ion: 1

Guanine nucleotide-binding protein G(i) subunit alpha-1: 1

Total number of atoms: 16904

Simulation details

Software and version: GROMACS, 2022.1

Forcefield and version: CHARMM, 36m

Time step : 2.0 fs

Delta : 0.2 ns

Replicates: 1

Accumulated simulation time: 0.1602 µs

Additonal parameters: Available at "Simulation protocol & starting files"

Simulation components

Visualization and trajectory sharing powered by NGL viewer and MDSrv

Open with GPCRmd Workbench

Mutations

Table of simulated mutations

Residue ID Residue seq. position Generic num. From To


Other molecules



CID 6830

Specific State ID: 5334

(1 molecule)


Magnesium ion

Specific State ID: 5335

(1 molecule)


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