Free cookie consent management tool by TermsFeed GPCRmd
× Due to a recent server update, this page will be slow for the next 1-2 hours. We apologize for any inconvenience this may cause.

Simulation report

Technical information

General information

Name: Gpr183_apo (apoform)

PDB id: 7TUZ

Activation state: Active

Submitted by: GPCRmd community

System setup

Solvent type: TIP3P

Membrane type: Homogeneous

Membrane composition: POPC

Ionic composition: Sodium ion (148 mM), Chloride (244 mM)

Number of molecules:

Water: 10920

POPC: 153

Chloride: 48

Sodium ion: 29

GPR183: 1

Total number of atoms: 58375

Simulation details

Software and version: Acemd, 3.5

Forcefield and version: Charmm, c36 Jul 2020

Time step : 4.0 fs

Delta : 1.0 ns

Replicates: 1

Accumulated simulation time: 4.5 µs

Additonal parameters: Available at "Simulation protocol & starting files"

Simulation components

Receptor

PDB id: 7TUZ
GPR183

Visualization and trajectory sharing powered by NGL viewer and MDSrv

Open with GPCRmd Workbench

Mutations

No mutations found



Other molecules



POPC

Specific State ID: 5152

(153 molecules)


Sodium ion

Specific State ID: 5153

(29 molecules)

Na+


Chloride

Specific State ID: 5154

(48 molecules)

Cl-


Water

Specific State ID: 5151

(10920 molecules)

H2O


PARTNER SERVERS

GPCRdb

GPCR-ModSim

GPCRM

NMRlipids

HomolWat

Hybrid MM/CG Webserver

CONTACT & LINKS

Documentation

Cite us

Privacy policy

Cookies policy

Disclaimer

Terms & Conditions

SUPPORTED BY

ERNEST (COST Action CA18133)

GLISTEN (COST Action CM1207)

GPCRForum

Creative Commons License

GPCRmd is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License .