Simulation report
Technical information
General information
Name: Glucagon-like peptide 1 receptor in complex with myzidyjmnwejmc-qhcpkhfhsa-n
PDB id: 6KJV
Activation state: Inactive
Description: Classical unbiased (NVT ensemble) complex flexibility assay.
Submitted by: GPCRmd community
System setup
Solvent type: TIP3P
Membrane type: Homogeneous
Membrane composition: POPC
Ionic composition: Sodium ion (156 mM), Chloride (168 mM)
Number of molecules:
Water: 26389
POPC: 322
Chloride: 80
Sodium ion: 74
CHEMBL3648185: 1
Glucagon-like peptide 1 receptor: 1
Total number of atoms: 127617
Simulation details
Software and version: ACEMD3, GPUGRID
Forcefield and version: CHARMM, c36 Jul 2020
Time step : 4.0 fs
Delta : 0.2 ns
Replicates: 3
Accumulated simulation time: 1.5 µs
Additonal parameters: Available at "Simulation protocol & starting files"
Simulation components
Ligands
Receptor
Mutations
No mutations found
