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Simulation report and files

General information

Name: NSP12-NSP7-NSP8 - SARS-CoV-2 Polymerase

Included proteins: NSP12, NSP8, NSP7

Uniprot ID: P0DTD1

Species: Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2)

PDB ID: 6M71

Submitted by: Exscalate4CoV

Submission date: September 23, 2020

System setup

Ligands: None

Membrane composition: None

Solvent type: TIP3P

Total number of atoms: 138650

Simulation details

Software and version: GROMACS 2020

Forcefield and version: AMBER 99

Time step : 1.0 fs

Delta : 0.1 ns

Replicates: 1

Accumulated simulation time: 2.6462 µs

Visualization and trajectory sharing powered by NGL Viewer and MDsrv.

The interaction network has been generated using Flare Plots, powered by R. Fonseca and A. J. Venkatakrishnan.

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NSP12-NSP7-NSP8 - SARS-CoV-2 Polymerase ( 6M71)

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